| Monday May 17th |
Morning |
| 09:00-12:30 |
| 08:30 |
|
Registration |
|
|
|
|
Chair: Tomasz Strabel |
| Session I Genetic architecture and QTL mapping of quantitative traits |
|
| 09:00 |
|
Organizing Committee |
Opening and introduction |
| 09:15 |
[pdf] |
William Hill |
Genetic architecture of quantitative traits (invited) |
| 09:45 |
[pdf] |
Mats Pettersson |
Re-examining epistatic interactions in Virginia line chickens |
| 10:00 |
[pdf] |
Carl Nettelblad |
Haplotype inference based on Hidden Markov Models in the QTL-MAS multi-generational dataset |
| 10:15 |
[pdf] |
Maciej Szydłowski |
Simulation of the QTLMAS 2010 common dataset |
| 10:30 |
|
Coffee break |
|
| 11:00 |
[pdf] |
Aniek Bouwman |
A Bayesian approach to detect (pleiotropic) QTL affecting a simulated binary and quantitative trait |
| 11:15 |
[pdf] |
Albart Coster |
Partial least square regression applied to the QTL-MAS 2010 dataset |
| 11:30 |
[pdf] |
Mario Calus |
Genomic breeding value estimation and QTL detection using univariate and bivariate models |
| 11:45 |
[pdf] |
Xia Shen |
Hierarchical likelihood opens a new way of estimating genetic values using genome-wide dense marker maps |
| 12:00 |
[pdf] |
Burak Karacaören |
Association analyses of the QTL-MAS data set using grammar, principal components and Bayesian network methodologies |
| 12:15 |
[pdf] |
Kacper Żukowski |
Testing association of genotypes with discrete and continuous traits |
| 12:30 |
|
Lunch |
|
| |
| |
| Monday May 17th |
Afternoon |
| 13:30-17:00 |
|
|
|
Chair: Paweł Krajewski |
| Session II Methods for QTL mapping detection and association analysis |
|
| 13:30 |
[pdf] |
Karl Broman |
The genetic dissection of complex traits in model organisms (invited) |
| 14:00 |
|
Animesh Acharjee |
Integrating genetic markers with ~omics data using genetical genomics and modern regression methods |
| 14:15 |
[pdf] |
Ghyslaine Schopen |
Genome wide association study using single and multiple SNP analysis |
| 14:30 |
[pdf] |
Simon Teyssčdre |
Robustness and power of single-SNP analysis in related populations |
| 14:45 |
|
Lucy Crooks |
Comparison of an improved method for calculating line origin probabilities against GridQTL using simulated data |
| 15:00 |
|
Coffee break |
|
| 15:30 |
|
Yurii Aulchenko |
Tutorial on *ABEL package (invited) |
| 16:00 |
[pdf] |
Robin Wellmann |
Genome wide evaluation using dominance |
| 16:15 |
|
Anna Johansson |
Genome wide effects of divergent selection for body weight in chickens |
| 16:30 |
[pdf] |
Saber Qanbari |
Using genome scans of DNA polymorphism to identify regions exhibiting positive selection |
| 16:45 |
[pdf] |
Organizing Committee |
Comparative analysis of submitted results on QTL mapping and applied methods |
| 18:30 |
|
Workshop dinner |
|
|
| |
| |
| Tuesday May 18th |
Morning |
| 9:00-12:30 |
|
|
|
Chair: Joanna Szyda |
| Session III Methods for estimation of genomic breeding values |
|
| 09:00 |
[pdf] |
Małgorzata Bogdan |
Genome-wide scans for quantitative trait loci in experimental populations - issues of multiple testing and model selection (invited) |
| 09:30 |
[pdf] |
Matthew Cleveland |
Genotype imputation for the prediction of genomic breeding values in non-genotyped and low-density genotyped individuals |
| 09:45 |
[pdf] |
Joseph Ogutu |
A comparison of random forests, boosting and support vector machines for genomic selection with SNP markers |
| 10:00 |
[pdf] |
Zhe Zhang |
Genomic selection using Best Linear Unbiased Prediction with a trait specific relationship matrix |
| 10:15 |
[pdf] |
Javad Nadaf |
Applying different genomic selection approaches on QTL-MAS 2010 data |
| 10:30 |
[pdf] |
Torben Schulz-Streeck |
Pre-selection of markers for genome-wide selection |
| 10:45 |
|
Coffee break |
|
| 11:15 |
[pdf] |
Yurii Aulchenko |
Methods for genome-wide association analyses of quantitative trait loci in human genetically isolated populations (invited) |
| 11:45 |
[pdf] |
Ronald Nelson |
A new R package for QTL analysis |
| 12:00 |
[pdf] |
Kacper Żukowski |
The estimation of SNP effects on a binary and a quantitative trait |
| 12:15 |
[pdf] |
Magdalena Malina |
Logic regression based methods in application to detection of gene-gene interactions |
| 12:30 |
|
Lunch |
|
| |
| |
| Tuesday May 18th |
Afternoon |
| 13:30-16:45 |
|
|
|
Chair: Maciej Szydłowski |
| Session IV Application of genomic selection |
| 13:30 |
[pdf] |
Alain Charcosset |
Genetic architecture of yield and related traits in European maize: insights into the effects of linkage and allelic series. Consequences for marker assisted selection. (invited) |
| 14:00 |
|
Weronica Ek |
Mapping systemic scleroderma genes in a cross between UCD200 and jungle fowl chickens |
| 14:15 |
[pdf] |
Joanna Szyda |
Genomic selection in Polish Holstein |
| 14:30 |
[pdf] |
Jan-Thijs van Kaam |
Validation experiences in Italian Holstein genomic selection |
| 14:45 |
[pdf] |
Organizing Committee |
Analysis of submitted breeding values and applied methods |
| 15:00 |
|
Coffee break |
|
| 15:30 |
|
Karl Broman |
Tutorial on R/qtl (invited) |
| 16:15 |
[pdf] |
Paweł Krajewski |
POLAPGEN-BD: a project on biotechnology for breeding cereals with increased resistance to drought |
| 16:30 |
|
Organizing Committee |
QTL-MAS 2010 Closing remarks |
