QTL-MAS 2010, Poznan, Poland. This file contains information about simulated QTLs for common dataset on QTL-MAS workshop in Poznan, Poland. Chr = chromosom Bpair = chromosomal position in basepair Freq = frequency of allele 1 Rep = 1 if QTL is represented (genotyped) in microarray QTL = qtl number as it appeared in QTL-MAS 2010 printed material QTLBT = 1 if QTL has pleiotropic effect (affect also binary trait) = 0 if QTL affects only quantitative trait Add = additive effect: half the difference between homozygote means, Add = [ M(11) - M(22) ] / 2 Chr Bpair Freq Rep QTL QTLBT Add Information 3 22415527 0.509 0 14 1 3.00 additive major controlled 3 71610807 0.526 1 17 0 3.00 additive major controlled 3 13511050 0.169 0 13 0 -1.98 additive random 3 89958143 0.881 0 20 1 1.66 additive random 4 15904305 0.466 0 23 1 0.96 additive random 3 46501247 0.601 0 16 0 -0.73 additive random 1 50389545 0.641 0 2 1 -1.56 additive random 2 67248417 0.467 0 8 1 -1.32 additive random 2 94680408 0.264 0 11 1 1.01 additive random 4 41526832 0.602 0 27 1 0.93 additive random 3 82333078 0.827 0 19 1 -0.95 additive random 1 63386317 0.300 0 4 1 -1.68 additive random 3 78153081 0.487 0 18 1 -0.76 additive random 2 74900411 0.389 0 10 1 0.85 additive random 4 6296223 0.240 0 22 1 1.25 additive random 4 33939494 0.530 0 25 0 -0.31 additive random 4 43949750 0.567 0 28 0 -0.22 additive random 2 30511220 0.375 0 6 1 1.02 additive random 2 95449160 0.268 0 12 1 1.69 additive random 4 97651414 0.891 0 30 1 1.92 additive random 2 2289495 0.844 0 5 1 -1.92 additive random 3 29034182 0.227 0 15 1 -1.11 additive random 1 58038782 0.665 0 3 1 -1.56 additive random 4 66939973 0.554 0 29 1 0.75 additive random 2 52441264 0.141 0 7 0 1.69 additive random 4 26749857 0.372 0 24 0 0.56 additive random 4 35354739 0.280 0 26 0 1.55 additive random 3 97097998 0.566 1 21 1 0.65 additive random 1 7536081 0.445 0 1 1 1.93 additive random 2 73750269 0.656 1 9 1 0.25 additive random 1 49185089 0.538 1 31 0 NA epist. pair 1 controlled 1 50316379 0.557 1 32 0 NA epist. pair 1 controlled 2 32617381 0.496 1 33 0 NA epist. pair 2 controlled 2 33139075 0.506 1 34 0 NA epist. pair 2 controlled 2 51745206 0.546 1 35 0 NA imprinted controlled 2 78604040 0.538 1 36 0 NA imprinted controlled 2 86012861 0.557 1 37 0 NA imprinted controlled Epistatic QTLs: Pair 1: [ QTL31 - QTL32 ] Extra effect of each haplotype 1-1: +4.00 Pair 2: [ QTL33 - QTL34 ] Extra effect of each haplotype 1-1: +4.00 Imprinted QTLs: QTL35 Extra effect of paternal allele 1: +3.0 QTL36 Extra effect of paternal allele 1: +3.0 QTL37 Extra effect of paternal allele 1: +3.0